| The list below (Table 1) provides the location
of the BAC clones for specific genes in the cat RPCI-86
BAC library from BACPAC Resources.
The Lyons research program will assist researchers in screening the cat
BAC library for genes of interest for the devlopment of models of human
disease. Additional clones are being isolated for the genes listed
in Table 2 and 3. Currently, these genes are listed as pools, but
once the individual clones are identified, they will be listed on Table
1. The clones can be purchased from BACPAC Resources or obtained
from the Lyons' Laboratory as a collaborative research effort.
This work is supported by funding granted by NIH-NCRR 1
R24 RR16094
Table 1. Individual Locations of BAC clones
in the RPCI - 86 BAC library for genes involved with mammalian disease.
| Gene Symbol |
BAC Position |
| ABCA4 |
196H13 |
| ABCC6 |
443A10 |
| AGRN |
127N16 |
| AGRP |
174O18 |
| AMACR |
182D16 |
| Ankyrin repeat |
86L21 |
| ASIP |
189H5 |
| bmp5 |
269K3 |
| CDKN2A |
311A19 |
| CHN2 |
555C22 |
| CKM |
367F9 |
| COL1A2 |
494M19 |
| CRX |
282I24 |
| CYLD |
279N10 |
| DAG1 |
161P3 |
| DCT |
152H14 |
| EDN3 |
170K2 |
| EDNRB |
269D22 |
| FOS |
473O9 |
| FUS |
56K7 |
| GDF6 |
320P2 |
| GDF8 |
72M21 |
| GFRA1 |
259D21 |
| GFRA2 |
205C21 |
| GPM6B |
536A13 |
| GUCY2D |
113H6 |
| HCRTR2 |
145G18 |
| HES1 |
144H18 |
| HEY1 |
185H1 |
| HOXD |
135B14 |
| IDAX |
63N13 |
| IFNA2 |
525B20 |
| IL10RB |
509B7 |
| IL2RA |
395D22 |
| ITSN1 |
295D18 |
| JUN |
466G9 |
| KIT |
613J14 |
| KITLG (MGF) |
158G13 |
| LCK |
207F5 |
| MAGE-H1 |
80A16 |
| MC1R |
248L10 |
| MERTK |
281A6 |
| MET |
49M22 |
| MITF |
85H18 |
| MYBPC3 |
173M24 |
| MYF5 |
165N22 |
| MYH6 |
162L2 |
| MYH7 |
117B19 |
| NDG |
90M16 |
| NFAT5 |
64D6 |
| NICE-5 |
73K13 |
| NPC1 |
123G3 |
| p53 |
474H17 |
| PAX3 |
490N23 |
| PAX4 |
554O6 |
| PAX6 |
73J4 |
| PDE1C |
221B13 |
| PDE6A |
242H23 |
| PDE6B |
212N5 |
| PFN2 |
73A13 |
| PK |
206E5 |
| PKD1 |
207P24 |
| PKD2 |
97N22 |
| PRKDC |
263M9 |
| pten |
138E21 |
| RAB38 |
40K24 |
| RDS |
149F5 |
| RET |
352I3 |
| RFC2 |
141L11 |
| RHO |
212I23 |
| ROM1 |
166L11 |
| ROXN |
51G17 |
| RPE65 |
173M24 |
| SCN4A |
159H8 |
| SCN9A |
386P20 |
| SCNA |
532E4 |
| SEC13L1 |
74I23 |
| SHH |
270O2 |
| SKB1 |
62B18 |
| sox10 |
70K14 |
| SOX9 |
26J19 |
| SYNJ1 |
564H6 |
| TGFalpha |
105L14 |
| TGFbeta |
127N16 |
| TYRP1 |
252K14 |
| TYRP2 |
152H14 |
Table 2. Pooled locations for BAC
clones in the RPCI - 86 BAC library for genes involved with mammalian
disease.
| Genes |
BAC Pool 1 |
|
Genes |
BAC Pool 2 |
|
Genes |
BAC Pool 3 |
|
| FMR |
340 I12 |
|
GALC |
241 L19 |
|
mapk1 |
337K18 |
|
| Fuca1 |
343 K19 |
|
GBE1 |
241 P2 |
|
cecr6 |
338D19 |
|
| INS |
344 A3 |
|
GCK |
242 H20 |
|
top3a |
339F11 |
|
| KIT |
345 A3 |
|
GSN |
247 K2 |
|
nf2 |
343B19 |
|
| MAOA |
358 M15 |
|
GUSB |
248 A18 |
|
pik4 |
343G9 |
|
| MBP |
359 G23 |
|
HEXB |
254 O10 |
|
ddt |
343I2 |
|
| MEN1 |
364 H7 |
|
IDS |
256 P18 |
|
xba |
343N19 |
|
| MIP |
368 C6 |
|
IDUA |
259 A13 |
|
timp3 |
346K19 |
|
| MYO5A |
368 E9 |
|
IL-20 |
262 C6 |
|
large |
348F10 |
|
| NRL |
368 G6 |
|
IL-21 |
262 E22 |
|
pkdrej |
348H14 |
|
| PFKL |
368 M7 |
|
IL-22 |
268 I21 |
|
acr |
349D4 |
|
| PITX3 |
374 K2 |
|
INSR |
270 B8 |
|
d6cr2 |
351L14 |
|
| PRKDC |
375 N8 |
|
L1CAM |
271 D6 |
|
aco2 |
356N20 |
|
| Spink5 |
386 B11 |
|
LYZ |
273 M19 |
|
pd6fb |
362E24 |
|
| TITF1 |
386 E11 |
|
MERTK |
284 K13 |
|
sox10 |
363G17 |
|
| TTN |
388 A12 |
|
MET |
579 E17 |
|
acrosin |
364C22 |
|
| |
390 E6 |
|
ROR1 |
585 A15 |
|
mb |
364G17 |
|
| |
396 K7 |
|
SLC3A1 |
585 N13 |
|
lif |
367A5 |
|
| |
399 B7 |
|
SLC9A7 |
588 L13 |
|
|
367G13 |
|
| |
400 C7 |
|
TTPA |
600 K2 |
|
|
367J8 |
|
| |
401 B22 |
|
|
601 H13 |
|
|
369E19 |
|
| |
405 C14 |
|
|
601 I20 |
|
|
369M6 |
|
| |
407 N22 |
|
|
603 A22 |
|
|
371I14 |
|
| |
407 N6 |
|
|
603 E22 |
|
|
377B7 |
|
| |
412 C21 |
|
|
611 E8 |
|
|
379D4 |
|
| |
412 G11 |
|
|
613 C17 |
|
|
381O12 |
|
| |
414 I14 |
|
|
|
|
|
384G17 |
|
| |
426 O18 |
|
|
|
|
|
437M10 |
|
| |
427 M22 |
|
|
|
|
|
438G8 |
|
| |
430 O7 |
|
|
|
|
|
440G17 |
|
| |
431 M1 |
|
|
|
|
|
440J4 |
|
| |
|
|
|
|
|
|
442B12 |
|
| |
|
|
|
|
|
|
442F12 |
|
| |
|
|
|
|
|
|
443D7 |
|
| |
|
|
|
|
|
|
447E16 |
|
| |
|
|
|
|
|
|
459F13 |
|
| |
|
|
|
|
|
|
459H12 |
|
| |
|
|
|
|
|
|
460A18 |
|
| |
|
|
|
|
|
|
471E1 |
|
| |
|
|
|
|
|
|
475N18 |
|
| |
|
|
|
|
|
|
478A20 |
|
Table 2. Pooled locations
for BAC clones in the RPCI - 86 BAC library for genes involved with mammalian
disease.
| Genes |
BAC Pool 4 |
| atp7a |
481C15 |
496G6 |
522O13 |
547A18 |
| bmp4 |
481E1 |
496I5 |
524L20 |
547E10 |
| bmp5 |
481K16 |
496I6 |
527O23 |
547E13 |
| bmp7 |
481L15 |
496L18 |
528C5 |
547E9 |
| cdk4 |
481M14 |
496M2 |
529A17 |
547F10 |
| chrne |
481M7 |
496M6 |
529A2 |
547G2 |
| clcn1 |
482B24 |
496O18 |
529B8 |
547H7 |
| cln3 |
482G19 |
497D23 |
529C18 |
547H9 |
| col1a1 |
483F16 |
497M22 |
529E10 |
547I3 |
| col1a2 |
483F19 |
497O15 |
529F8 |
547I4 |
| ednrb |
483M22 |
498F12 |
529G17 |
547J4 |
| dmd |
484C19 |
498H13 |
529H24 |
547N10 |
| egf |
484E11 |
499B8 |
529H9 |
547O7 |
| f8 |
484I19 |
499G11 |
529I13 |
547P6 |
| fgf1 |
484I24 |
499G4 |
529J6 |
547P7 |
| fgf2 |
484J17 |
499O10 |
529M21 |
553A23 |
| fgfr1 |
484K24 |
500F13 |
529M4 |
553C6 |
| fgfr3 |
485B14 |
501H22 |
529M5 |
553G5 |
| fgfr3 |
485F11 |
502C18 |
530P19 |
553H9 |
| fgfr4 |
485G8 |
502J15 |
535A3 |
553I14 |
| glb1 |
485J11 |
502O2 |
535A8 |
553I6 |
| hcrt |
485M8 |
503F18 |
535C20 |
553L7 |
| hexa |
486B18 |
503M15 |
535D10 |
553M6 |
| hexb |
486E6 |
503O14 |
535D20 |
553M9 |
| hr |
486G11 |
504M12 |
535D22 |
553N24 |
| lyst |
486M10 |
504P5 |
535D8 |
553N8 |
| mdm2 |
486M14 |
505E13 |
535E8 |
553O14 |
| mhl2 |
487B9 |
505F3 |
535F11 |
553P16 |
| pde6a |
487G10 |
508G4 |
535H21 |
553P3 |
| pde6b |
487M10 |
508G8 |
535H4 |
559A10 |
| pd6fa |
487M11 |
508L7 |
535H7 |
559C7 |
| pvr |
488D19 |
509M7 |
535H8 |
559F8 |
| ramp3 |
488I21 |
510G12 |
535I1 |
559H13 |
| rp1 |
488L16 |
510H3 |
535I6 |
559H5 |
| rp2 |
488M20 |
510O8 |
535J24 |
559J1 |
| ryr2 |
488O17 |
511C1 |
535K1 |
559J13 |
| sod1 |
488O19 |
511L7 |
535L3 |
559N7 |
| tnn13 |
489G23 |
514G3 |
535N6 |
560H22 |
| tpm1 |
490E10 |
514L20 |
535N7 |
560O15 |
| ve6f |
490E13 |
515D7 |
536H21 |
565B10 |
| ve6fr flt |
490E20 |
515H2 |
536O13 |
565C15 |
| ve6fr kdr |
490K8 |
515I1 |
536P16 |
565C23 |
| amh |
490L8 |
515J20 |
536P18 |
565F9 |
| bmp15 |
491J2 |
515L9 |
541A6 |
565G23 |
| bmp 2 |
491L23 |
515N1 |
541B11 |
565G9 |
| xdh |
491M21 |
515O19 |
541B17 |
565I4 |
| bmp6 |
491M4 |
515P12 |
541C16 |
565J10 |
| chrn6 |
491P20 |
516K9 |
541C4 |
565K23 |
| ed1 |
491P5 |
516N11 |
541C8 |
565L10 |
| gucy2d |
492M19 |
518A13 |
541E14 |
565L7 |
| ldl |
493P20 |
518A22 |
541F10 |
565M4 |
| lrat |
494C16 |
518J21 |
541F23 |
565N6 |
| pax6 |
495G9 |
518L13 |
541F7 |
565O6 |
| pfkm |
495L21 |
520D14 |
541H19 |
565P6 |
| ppar6 |
495M21 |
520D16 |
541J1 |
571F1 |
| pth |
495O20 |
520O12 |
541L11 |
571F23 |
| slc7 a9 |
496F14 |
521K5 |
541M9 |
571K7 |
| vhl |
496G13 |
522N6 |
541P10 |
571L15 |
| |
|
|
|
571M4 |
| |
|
|
|
572D22 |
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the webmaster: felinegenome@ucdavis.edu
|